 The Thrall, Part 2
(EPISODE 14) Team Helix and the crew of the U.S.S. Raleigh are under the thrall of a mysterious entity. Now Jann Jaxa has to enlist the help of the man who's sworn to kill her... Eric Beckett. (A prequel to the series finale).
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The Thrall, Part 1
(EPISODE 13) On the fringes of the Neutral Zone, a starship graveyard holds a horrible secret. Now, Jann Jaxa has to form uneasy alliances to save the rest of Team Helix from... The Thrall...
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Cry Havoc - Part 2: The Dogs Of War
( EPISODE 13 ) A crossover with Walter Chmara's 'Timeship Atlantis'! Chapel's finest hour is at hand. He has unleashed his master plan, which has left Team Helix at his mercy. Now in the final moments, all he has to do is eliminate the team and claim the spoils of war. But unbeknownst to him, his most trusted allies may not appear to be who they seem!
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Cry Havoc - Part 1: Section 31
( EPISODE 12 ) A crossover with Walter Chmara's 'Timeship Atlantis'! Eric Beckett has got a secret that threatens to destory everything Team Helix holds dear. Now Walter Chapel and Section 31's primary agenda is compromised, and they'll do whatever it takes to keep the conspiracy from coming to light. Even destroy Team Helix itself!
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 Children of the Lesser Gods
( EPISODE 11 ) The young prophet, Corann is said to be Bajor's second coming, and Team Helix is hired to help him discover his destiny. So why is their former Captain, Alex Garrett back from the dead and out kill the child? The answer will shock you....
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The Bajoran and the Windy City
( EPISODE 8 ) What does a Bajoran do when he's unexplainably tranplanted from his own body and into one of Earth greatest super sleuths? Find out when former Team Helix member, Ian Rojeti combats the forces of mob-evil as the infamous Detective, Dixon Hill! Little does he suspect, the identity of his arch nemesis hits closer to home than he could imagine...
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Interview with a Vulcan
( EPISODE 9 ) It's been 18 months since Team Helix was imprisoned and the PROGRAM destroyed. Now, Section 31 wants to figure out what the deceased Admiral Cynthia Porter was up to. And they'll do whatever it takes... even if it means giving Team Helix a second chance.
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Phantoms
(EPISODE 3) It's several years since Team Helix joined THE PROGRAM, and the crew is sent to investigate a strange occurrence in Klingon space. But a routine recon mission turns into what could be full scale war, with the Alpha Quadrant as the ultimate prize. . . .
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Virus
( EPISODE 10 ) On a remote planet in the Delta Quadrant, the Dominion have been experimenting on Starfleet P.O.W.'s. Now Mia must take the newly reformed Team Helix behind enemy lines to rescue the fallen soldiers. But once they uncover the Dominion's shocking secret, they have to consider whether the hostages would be better off dead..
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Phantoms, part 2
(EPISODE 4) A new Superpower has been discovered, and their trying to plunge the Alpha Quadrant into an intergalactic war. Now with countless lives on the line, Team Helix and a renegade Klingon out for revenge, have to find away to stop the massacre before it starts.
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